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極危 Critically Endangered
- Aythya baeri (Radde, 1863) Baer'sPochard
- Carpinus hebestroma Yamamoto, 1932 太魯閣千金榆
- Cinnamomum kotoense Kanehira & Sasaki, 1930 蘭嶼肉桂
- Citrus taiwanica Tanaka & Shimada, 1962 南庄橙
- Cryptocarya elliptifolia Merr., 1919 菲律賓厚殼桂
- Cypripedium segawae Masam., 1933 寶島喜普鞋蘭
- Diospyros vaccinioides Lindl., 1825 楓港柿
- Eretmochelys imbricata Conant, 1991 鷹嘴海龜
- Euonymus pallidifolia Hayata, 1913 淡綠葉衛矛
- Geothelphusa lanyu Shy, Ng & Yu, 1994 蘭嶼澤蟹
- Geothelphusa lutao Shy, Ng & Yu, 1994 綠島澤蟹
- Isoetes taiwanensis DeVol, 1972 臺灣水韭
- Leucogeranus leucogeranus (Pallas, 1773) 白鶴
- Paulownia kawakamii Ito, 1912 川泡桐
- Pinanga tashiroi Hayata, 1913 山檳榔
- Pyrenaria buisanensis (Sasaki) C. F. Hsieh, S. Z. Yang & M. H. Su 2004 武威山烏皮茶
- Thalasseus bernsteini (Schlegel, 1863) 黑嘴端鳳頭燕鷗
